[1] ZHANG Xiaopei, DONG Jie, DENG Fenni, et al. The long non-coding RNA lncRNA973 is involved in cotton response to salt stress [J]. BMC Plant Biology, 2019, 19(1): 443 − 459.
[2] HEO J B, LEE Y S, SUNG S. Epigenetic regulation by long noncoding RNAs in plants [J]. Chromosome Research, 2013, 21(6/7): 685 − 693.
[3] DERRIEN T, JOHNSON R, BUSSOTTI G, et al. The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression [J]. Genome Reseach, 2012, 22(9): 1775 − 1789.
[4] CHEKANOVA J A. Long non-coding RNAs and their functions in plants [J]. Current Opinion Plant Biology, 2015, 27: 207 − 216.
[5] KOPP F, MENDELL J T. Functional classification and experimental dissection of long noncoding RNAs [J]. Cell, 2018, 172(3): 393 − 407.
[6] ENGREITZ J M, PANDYA-JONES A, MCDONEL P, et al. The Xist lncRNA exploits three-dimensional genome architecture to spread across the X-chromosome [J/OL]. Science, 2013, 341(6147): 1237973[2022-05-10]. doi: 10.1126/science.1237973.
[7] YUAN Tingting, ZHU Chenglei, LI Guangzhu, et al. An integrated regulatory network of mRNAs, microRNAs, and lncRNAs involved in nitrogen metabolism of moso bamboo[J]. Frontiers in Genetics, 2022, 13: 854346. doi:10.3389/fgene.2022.854346.
[8] GUIL S, ESTELLER M. Cis-acting noncoding RNAs: friends and foes [J]. Nature Structural &Molecular Biology, 2012, 19(11): 1068 − 1075.
[9] ZHANG Yuchan, LIAO Jianyou, LI Zeyuan, et al. Genome-wide screening and functional analysis identify a large number of long noncoding RNAs involved in the sexual reproduction of rice [J]. Genome Biology, 2014, 15(12): 512 − 528.
[10] ARIEL F, JEGU T, LATRASSE D, et al. Noncoding transcription by alternative RNA polymerases dynamically regulates an auxin-driven chromatin loop [J]. Molecular Cell, 2014, 55(3): 383 − 396.
[11] BERRY S, DEAN C. Environmental perception and epigenetic memory: mechanistic insight through FLC [J]. The Plant Journal, 2015, 83(1): 133 − 148.
[12] MOISON M, PACHECO J M, LUCERO L, et al. The lncRNA APOLO interacts with the transcription factor WRKY42 to trigger root hair cell expansion in response to cold [J]. Moleclar Plant, 2021, 14(6): 937 − 948.
[13] MATZKE M A, MOSHER R A. RNA-directed DNA methylation: an epigenetic pathway of increasing complexity [J]. Nature Reviews Genetics, 2014, 15(6): 394 − 408.
[14] WANG Jiongliang, HOU Yinguang, WANG Yu, et al. Integrative lncRNA landscape reveals lncRNA-coding gene networks in the secondary cell wall biosynthesis pathway of moso bamboo (Phyllostachys edulis)[J/OL]. BMC Genomics, 2021, 22(1): 638[2022-05-10]. doi: 10.1186/s12864-021-07953-z.
[15] GOLICZ A A, SINGH M B, BHALLA P L. The long intergenic noncoding RNA (LincRNA) landscape of the soybean genome [J]. Plant Physiology, 2018, 176(3): 2133 − 2147.
[16] WANG Dong, QU Zhipeng, YANG Lan, et al. Transposable elements (TEs) contribute to stress-related long intergenic noncoding RNAs in plants [J]. The Plant Journal, 2017, 90(1): 133 − 146.
[17] ZHAO Ting, TAO Xiaoyuan, FENG Shouli, et al. LncRNAs in polyploid cotton interspecific hybrids are derived from transposon neofunctionalization[J/OL]. Genome Biology, 2018, 19(1): 195[2022-05-10]. doi: 10.1186/s13059-018-1574-2.
[18] LÜ Yuanda, HU Fengqin, ZHOU Yongfeng, et al. Maize transposable elements contribute to long non-coding RNAs that are regulatory hubs for abiotic stress response [J/OL]. BMC Genomics, 2019, 20(1): 864[2022-05-10]. doi: 10.1186/s12864-019-6245-5.
[19] 王益军, 王亚丽, 陈煜东. 转座子来源的植物长链非编码RNA[J]. 植物学报, 2020, 55(6): 768 − 776.

WANG Yijun, WANG Yali, CHEN Yudong. Transposon-derived long noncoding RNA in plants [J]. Chinese Bulletin of Botany, 2020, 55(6): 768 − 776.
[20] 彭忠明, 徐克凡, 周凯, 等. 毛竹DNA甲基转移酶家族的鉴定与生物信息学分析[J/OL]. 分子植物育种, 2022-04-26[2022-05-10]. https://kns.cnki.net/kcms/detail/46.1068.S.20220426.0814.002.html.

PENG Zhongming, XU Kefan, ZHOU Kai, et al. Identification and biological information analysis of Phyllostachys edulis DNMT genefamily [J/OL]. Molecular Plant Breeding, 2022-04-26[2022-05-10]. https://kns.cnki.net/kcms/detail/46.1068.S.20220426.0814.002.html.
[21] 吴佳军. 毛竹转座子来源的非编码RNA在非生物胁迫中的响应机制[D]. 杭州: 浙江农林大学, 2019.

WU Jiajun. The Response Mechanism of Phyllostachys edulis Transposable Non-coding RNA in Abiotic Stress[D]. Hangzhou: Zhejiang A&F University, 2019.
[22]

HUNTER K W, AMIN R, DEASY S, et al. Genetic insights into the morass of metastatic heterogeneity [J]. Nature Reviews Cancer, 2018, 18(4): 211 − 223.
[23]

JIA Hui, OSAK M, BOGU G K, et al. Genome-wide computational identification and manual annotation of human long noncoding RNA genes [J]. RNA, 2010, 16(8): 1478 − 1487.
[24] 刘琳营, 苏晓俊, 闵玲. 植物中长链非编码RNA研究进展综述[J]. 江苏农业科学, 2021, 49(12): 12 − 19.

LIU Linying, SU Xiaojun, MIN Ling. Research progress of long non-coding RNA in plants: a review [J]. Jiangsu Agricultural Science, 2021, 49(12): 12 − 19.
[25] 张玉婵, 陈月琴. 长链非编码RNA在植物生殖发育中的调控作用[J]. 生命科学, 2016, 28(6): 640 − 644.

ZHANG Yuchan, CHEN Yueqin. Long non-coding RNAs in plant reproductive growth [J]. Chinese Bulletin of Life Sciences, 2016, 28(6): 640 − 644.
[26] 吕秉哲, 马东江, 魏成, 等. LncRNA对胃癌表型的影响及诊疗潜力[J]. 生命的化学, 2022, 42(3): 64 − 73.

LÜ Bingzhe, MA Dongjiang, WEI Cheng, et al. Emerging impact of long noncoding RNA and its molecular mechanisms in gastric cancer [J]. Chemistry of Life, 2022, 42(3): 64 − 73.
[27] 林诗晗, 邹璐宁, 林雪梅, 等. 基于TCGA/GEO数据库对lncRNA在口腔鳞状细胞癌中甲基化水平及预后相关性的分析[J]. 实用口腔医学杂志, 2022, 38(3): 368 − 372.

LIN Shihan, ZOU Ling, LIN Xuemei, et al. Identification of DNA methylationoflnc RNA for predicting prognosis of oral squamous cell carcinoma based on TCGA/GEO database [J]. Journal of Practical Stomatology, 2022, 38(3): 368 − 372.
[28] 王益玲, 王留珍, 冯海燕. 生物信息学分析长链非编码RNA在变应性鼻炎中的作用[J]. 中国耳鼻咽喉颅底外科杂志, 2022, 28(1): 51 − 57.

WANG Yiling, WANG Liuzhen, FENG Haiyan. Role analysis of long non-coding RNA in allergic rhinitis based on bioinformatics [J]. The Chinese Journal of Otolaryngology-Cranial Bottom Surgery, 2022, 28(1): 51 − 57.
[29] 赵雷. 拟南芥长链非编码RNA调控高温胁迫响应的机理研究[D]. 泰安: 山东农业大学, 2017.

ZHAO Lei. Functional Analysis of Long Nocoding RNA for Heat Stress Tolerance in Arabidopsis[D]. Tai’an: Shandong Agricultural University, 2017.
[30]

MA Peng, ZHANG Xiao, LUO Bowen, et al. Transcriptomic and genome-wide association study reveal long noncoding RNAs responding to nitrogen deficiency in maize[J/OL]. BMC Plant Biology, 2021, 21(1): 93[2022-05-10]. doi: 10.1186/s12870-021-02847-4.
[31] 张晓佩. 陆地棉长链非编码RNAs-lncRNA354和lncRNA973的功能和作用机制研究[D]. 泰安: 山东农业大学, 2022.

ZHANG Xiaopei. Function and Mechanism Studies of Upland Cotton Long Non-coding RNAs-lncRNA354 and lncRNA973[D]. Tai’an: Shandong Agricultural University, 2022.
[32]

FERREIRA K N, IVERSON T M, MAGHLAOUI K, et al. Architecture of the photosynthetic oxygen-evolving center [J]. Science, 2004, 303(5665): 1831 − 1838.
[33]

SIROHIWAL A, NEESE F, PANTAZIS D A. Protein matrix control of reaction center excitation in photosystem Ⅱ [J]. Journal of American Chemical Society, 2020, 142(42): 18174 − 18190.