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丹参Salvia miltiorrhiza为唇形科Lamiaceae鼠尾草属Salvia多年生草本植物,又称红根、赤参[1−2]。其主要药用部位为干燥根或根茎,具有活血通经、祛瘀止痛、清心除烦、凉血消痈等功效[3]。研究表明:丹参含有多种化学活性成分,主要为脂溶性的萜类化合物和水溶性的酚酸类成分,具有保护心肌、抗凝血、抗炎、抗肿瘤等药理学功效[4−5]。目前,丹参面临野生种质资源被破坏、栽培生长周期长、有效成分含量低等问题[6],使得丹参品质退化,其原料药在临床上的可持续利用受限。因此,研究丹参药用活性成分的生物合成分子机制,可为丹参品种的选育提供科学依据。
茉莉酸信号分子参与植物生长发育等多个生理活动的调控,尤其在生物和非生物胁迫的防御反应中发挥着关键作用[7−8]。GE等[9]研究表明:甲基茉莉酸(MeJA)能诱导促进丹参酮的合成。ZHOU等[10]研究发现:丹参毛状根用MeJA处理后,酚酸类成分的含量显著提高。迄今为止,丹参酮在生物合成途径上的相关合成酶基因被大量克隆与鉴定[11−14];多个具有调控功能的转录因子如bHLH、MYB等也相继被挖掘[15−21],这些研究为全面解析转录因子调控丹参次生代谢物生物合成奠定了良好的基础。研究表明:bHLH类转录因子能响应MeJA信号调控植物次生代谢物的合成[21−25]。本研究通过比较转录组数据库,筛选获得1个响应MeJA诱导显著上调的丹参bHLH类转录因子。采用同源克隆的方法,克隆了该转录因子,命名为SmJRB2基因。基于农杆菌Agrobacterium tumefaciens介导的丹参遗传转化技术,对SmJRB2基因在丹参药用成分代谢合成中的功能及其表达特征进行了分析,以探究SmJRB2基因在MeJA信号通路中的功能,为解析丹参品质的形成机制和品种分子选育提供理论支撑。
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丹参无菌苗,亚细胞定位瞬时表达载体和遗传转化超表达载体(pHB-X-YFP),大肠埃希菌Escherichia coli DH5α,农杆菌菌株C58C1、GV3101和EHA105为浙江中医药大学中药生物技术实验室保存;平末端试剂盒(pEASY-Blunt Cloning,北京全式金生物科技公司),柱式质粒DNA小量抽提试剂盒(上海生工生物公司),植物总RNA提取试剂盒和实时荧光定量PCR (RT-qPCR)试剂盒(天根生物科技有限公司),限制性核酸内切酶(Thermo Fisher Scientific),PowerUpTM SYBRTM Green Master (Applied Biosystem)。
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按照植物总RNA提取试剂盒操作说明,提取丹参总RNA,用质量浓度为1%的琼脂糖凝胶电泳来检测其完整性,并使用微量核酸蛋白测定仪测定RNA的浓度与波长260、280 nm下吸光度比值D(260/280),检测合格后备用。使用RT-qPCR试剂盒对检测合格的RNA进行反转录,合成双链cDNA备用。
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以丹参cDNA为模板,基于已测得的丹参转录组数据(NCBI登录号:GSE100970)拼接获得的SmJRB2序列信息,设计特异性引物组合SmJRB2-BamHⅠ-F和SmJRB2-SpeⅠ-R,以及SmJRB2-Anti-BamHⅠ-F和SmJRB2-Anti-SpeⅠ-R (表1),用来扩增目标SmJRB2基因序列;将PCR扩增产物进行琼脂糖凝胶电泳检测,将获得的目的DNA片段切下,通过胶回收试剂盒回收;取5 μL胶回收产物进行凝胶电泳检测,剩余的DNA回收片段用于克隆载体pMD-19T构建、转化大肠杆菌、阳性克隆鉴定与测序检测。测序正确的SmJRB2基因序列用于pHB超表达和反义抑制表达载体的构建。
表 1 引物序列信息
Table 1. Primer sequences used in this study
引物名称 引物序列 (5′→3′) 引物名称 引物序列 (5′→3′) SmJRB2-BamHⅠ-F TCTCTCTCTAAGCTTGGATCCATGGGAAAGAAAGT ATGGTGGAATGAAGAAG SmCPS1-609R
SmKSL1-1480FTTCGAACCCACAAGTCATGT
GTGTGACCCTTCTGCTAGCASmJRB2-SpeⅠ-R GCCCTTGCTCACCATACTAGTTTTCAAGAGAGCAG CAGTTAACTTATCTTTCA SmKSL1-1630R
SmDXS2-1828FTGCATTGTCTTGGGAAGATG
TTGGAGATTGGGAAGGGAAGGATSmJRB2-Anti-BamHⅠ-F GGACTAGTATGGGAAAGAAAGTATGGTGGAATG SmDXS2-1980R
SmDXR-1248FAGGCTTGCAGAATCTCGCATCAG
CGACGAGAAAATCGGATACCTGGSmJRB2-Anti-SpeⅠ-R CGGGATCCTCATTTCAAGAGAGCAGCAGTTAACT SmDXR-1424R
SmHMGR-QFCATACAAGAGCAGGACTCGAACC
TCGTTTTCAATAAGTCGAGTAGAQF23 CCAAAGTTGTAAAGGCGTTGAGA SmHMGR-QR ATTCTGAAGGAAGTCCAAAACAT NOS-R TGGTGCAGATGAACTTCAGGGT SmCYP76AH1-1010F TCGTGGATGAGTCGGCAAT rolB-F GCTCTTGCAGTGCTAGATTT SmCYP76AH1-1168R TGAGTATCTGAGTTCCCT rolB-R GAAGGTGCAAGCTACCTCTC SmActin-QF1011 AGCACCGAGCAGCATGAAGATT SmCPS1-459F GATCGCCTCGTCAATACCAT SmActin-QR1210 AGCAAAGCAGCGAACGAAGAGT -
使用Vector NTI对候选基因的氨基酸进行同源比对分析,比较其保守结构域并着色。通过网站NCBI的blastp工具筛选同源氨基酸序列,采用MEGA 5.1绘制进化树。使用网站ExPASy分析蛋白质的分子量和理论等电点;使用网站TMHMM Server v2.0分析其是否有跨膜结构域;使用网站SignalP 4.1 Server分析基因信号肽[26−28]。
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向培养1个月且生长状态良好的毛状根中加入10 µmol·L−1的MeJA进行诱导处理,选择0、0.5、1.0、2.0、4.0、6.0、9.0和12.0 h共8个时间点进行收获,每个时间点3次重复。以稀释20倍的cDNA为模板,根据需检测的基因设计特异RT-qPCR检测引物(表1)。以丹参Actin为内参基因,进行RT-qPCR检测,反应体系:8.0 μL RNase-free ddH2O,10.0 μL 2×SuperReal PreMix,0.2 μL 50×ROX Reference Dye,0.4 μL正向引物(QF),0.4 μL反向引物(QR),1.0 μL模板(cDNA)。
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将上述测序正确的pMD-19T-SmJRB2大肠埃希菌阳性克隆以及包含pHB-X-YFP空质粒的大肠埃希菌,分别提取质粒后用BamHⅠ和SpeⅠ进行双酶切、电泳和切胶回收纯化;取SmJRB2基因回收片段与pHB-X-YFP空质粒双酶切回收的大片段进行连接、转化大肠埃希菌、阳性克隆鉴定及再转化C58C1农杆菌。
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采用十六烷基三甲基溴化铵法(CTAB)法[13]分别提取上述获得的丹参毛状根系总DNA,作为PCR反应扩增的模板;再依据SmJRB2基因编码序列设计上游引物QF,pHB载体中NOS终止子设计下游引物NOS-R,扩增特异性DNA片段序列;再采用引物rolB-F和rolB-R扩增rolB基因(表1)。将不含SmJRB2基因的pHB空载体进行遗传转化,以获得超表达和反义抑制的毛状根,再以提取的总DNA为模版进行扩增,作为PCR鉴定的阴性对照。PCR反应条件如下:94 ℃预变性5 min;94 ℃变性45 s、58 ℃退火 45 s、72 ℃延伸1 min,35个循环;72 ℃延伸8 min。PCR扩增产物经琼脂糖凝胶电泳验证是否为阳性毛状根系。
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根据阳性鉴定结果,筛选出超表达效果较好的阳性毛状根,将生长良好的毛状根接入100 mL 1/2 MS液体培养基中,在摇床中25 ℃、120 r·min−1避光扩大培养,培养至60 d即可收根。分别检测丹参酮合成途径DXS2、DXR、HMGR、CPS1、KSL1和CYP76AH1基因的表达量,检测引物如表1所示。
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分别收集3个SmJRB2超表达与3个抑制表达毛状根系,用液氮研磨成粉,冷冻干燥处理24 h;取100 mg干粉,加入16 mL甲醇/三氯甲烷(体积比为3∶1),超声处理1 h后再过夜浸提,12 000×g离心10 min收集上清液倒入蒸馏烧瓶中,50 ℃蒸馏去掉提取液,6 500×g离心10 min收集药效提取物干物质。收集的干物质用1 mL蒸馏水充分溶解,再用0.22 µmol·L−1滤膜过滤。过滤后的样品通过高效液相色谱(HPLC)检测毛状根中丹参酮的质量分数[29]。
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所有测试数据用SPSS 16.0进行t检验单因素方差分析。所有基因表达量和丹参酮质量分数检测均为3次生物学重复,取平均值。
Cloning and functional identification of SmJRB2 gene in Salvia miltiorrhiza
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摘要:
目的 丹参Salvia miltiorrhiza是治疗心脑血管疾病的常用中药材。解析丹参药效物质合成代谢的分子调控机制能为丹参优质新品种的选育提供科学依据。 方法 基于比较转录组挖掘获得响应甲基茉莉酸(MeJA)诱导的转录因子SmJRB2。采用同源克隆技术克隆获得该基因的编码序列,并进行生物信息学分析。采用实时荧光定量PCR (RT-qPCR)分析SmJRB2基因的组织表达和MeJA诱导表达特征;基于农杆菌Agrobacterium tumefaciens介导的丹参遗传转化技术对SmJRB2基因的功能进行鉴定。 结果 SmJRB2共编码501个氨基酸,属于bHLH转录因子家族的MYC类转录因子。SmJRB2基因在丹参叶片和主根中的表达量最高。SmJRB2基因强烈响应MeJA的诱导, 诱导4.0 h时表达量最高。超表达SmJRB2促进丹参酮的积累,抑制表达SmJRB2基因则降低丹参酮的合成。 结论 SmJRB2是丹参酮代谢合成的正向调节因子。图8表1参40 Abstract:Objective Salvia miltiorrhiza is a traditional Chinese medicine used in clinical treatment of cardiovascular and cerebrovascular diseases. Elucidating the molecular regulation mechanism of metabolism and synthesis of pharmacophore of S. miltiorrhiza can provide scientific basis for breeding new varieties of S. miltiorrhiza with high quality. Method The transcriptional factor SmJRB2 in response to methyljasmonic acid (MeJA) induction was picked out based on comparative transcriptome mining. The coding sequence of this gene was cloned using homologous cloning technology and analyzed by bioinformatics. The tissue expression and MeJA induced expression of SmJRB2 gene were detected by quantitative real-time polymerase chain reaction (RT-qPCR). The function of SmJRB2 gene was identified based on the genetic transformation technology of S. miltiorrhiza mediated by Agrobacterium tumefaciens. Result The results showed that SmJRB2 encoded 501 amino acids and belonged to the MYC transcription factor of bHLH transcription factor family. The expression of SmJRB2 gene was the highest in leaves and principal root. SmJRB2 gene was intensively induced by MeJA and its highest expression level peaked at the induction time of 4.0 h. Overexpression of SmJRB2 promoted the accumulation of tanshinones and suppression of SmJRB2 gene decreased the biosynthesis of tanshinones. Conclusion SmJRB2 is a positive regulator of tanshinone metabolic synthesis. [Ch, 8 fig. 1 tab. 40 ref.] -
Key words:
- Salvia miltiorrhiza /
- SmJRB2 /
- cloning /
- expression profile /
- functional identification
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表 1 引物序列信息
Table 1. Primer sequences used in this study
引物名称 引物序列 (5′→3′) 引物名称 引物序列 (5′→3′) SmJRB2-BamHⅠ-F TCTCTCTCTAAGCTTGGATCCATGGGAAAGAAAGT ATGGTGGAATGAAGAAG SmCPS1-609R
SmKSL1-1480FTTCGAACCCACAAGTCATGT
GTGTGACCCTTCTGCTAGCASmJRB2-SpeⅠ-R GCCCTTGCTCACCATACTAGTTTTCAAGAGAGCAG CAGTTAACTTATCTTTCA SmKSL1-1630R
SmDXS2-1828FTGCATTGTCTTGGGAAGATG
TTGGAGATTGGGAAGGGAAGGATSmJRB2-Anti-BamHⅠ-F GGACTAGTATGGGAAAGAAAGTATGGTGGAATG SmDXS2-1980R
SmDXR-1248FAGGCTTGCAGAATCTCGCATCAG
CGACGAGAAAATCGGATACCTGGSmJRB2-Anti-SpeⅠ-R CGGGATCCTCATTTCAAGAGAGCAGCAGTTAACT SmDXR-1424R
SmHMGR-QFCATACAAGAGCAGGACTCGAACC
TCGTTTTCAATAAGTCGAGTAGAQF23 CCAAAGTTGTAAAGGCGTTGAGA SmHMGR-QR ATTCTGAAGGAAGTCCAAAACAT NOS-R TGGTGCAGATGAACTTCAGGGT SmCYP76AH1-1010F TCGTGGATGAGTCGGCAAT rolB-F GCTCTTGCAGTGCTAGATTT SmCYP76AH1-1168R TGAGTATCTGAGTTCCCT rolB-R GAAGGTGCAAGCTACCTCTC SmActin-QF1011 AGCACCGAGCAGCATGAAGATT SmCPS1-459F GATCGCCTCGTCAATACCAT SmActin-QR1210 AGCAAAGCAGCGAACGAAGAGT -
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